J4_6N8O_001
3D structure
- PDB id
- 6N8O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UC*GAGUCG*CUAAGUG*UAAA
- Length
- 19 nucleotides
- Bulged bases
- 6N8O|1|A|U|298
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8O|1|A|U|112
6N8O|1|A|C|113
*
6N8O|1|A|G|267
6N8O|1|A|A|268
6N8O|1|A|G|269
6N8O|1|A|U|270
6N8O|1|A|C|271
6N8O|1|A|G|272
*
6N8O|1|A|C|293
6N8O|1|A|U|294
6N8O|1|A|A|295
6N8O|1|A|A|296
6N8O|1|A|G|297
6N8O|1|A|U|298
6N8O|1|A|G|299
*
6N8O|1|A|U|316
6N8O|1|A|A|317
6N8O|1|A|A|318
6N8O|1|A|A|319
Current chains
- Chain A
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain N
- 60S ribosomal protein L13-A
- Chain a
- 60S ribosomal protein L15-A
- Chain u
- 60S ribosomal protein L35-A
- Chain v
- 60S ribosomal protein L36-A
Coloring options: