3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
CUAAACCUAG*CAAUAGAUAUAGUAC*GGAAAGAUGAAA*UAUAACCAAG
Length
47 nucleotides
Bulged bases
6NU3|1|A|U|1774, 6NU3|1|A|A|1801, 6NU3|1|A|A|1808, 6NU3|1|A|U|1809
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6NU3|1|A|C|1672
6NU3|1|A|U|1673
6NU3|1|A|A|1674
6NU3|1|A|A|1675
6NU3|1|A|A|1676
6NU3|1|A|C|1677
6NU3|1|A|C|1678
6NU3|1|A|U|1679
6NU3|1|A|A|1680
6NU3|1|A|G|1681
*
6NU3|1|A|C|1771
6NU3|1|A|A|1772
6NU3|1|A|A|1773
6NU3|1|A|U|1774
6NU3|1|A|A|1775
6NU3|1|A|G|1776
6NU3|1|A|A|1777
6NU3|1|A|U|1778
6NU3|1|A|A|1779
6NU3|1|A|U|1780
6NU3|1|A|A|1781
6NU3|1|A|G|1782
6NU3|1|A|U|1783
6NU3|1|A|A|1784
6NU3|1|A|C|1785
*
6NU3|1|A|G|1792
6NU3|1|A|G|1793
6NU3|1|A|A|1794
6NU3|1|A|A|1795
6NU3|1|A|A|1796
6NU3|1|A|G|1797
6NU3|1|A|A|1798
6NU3|1|A|U|1799
6NU3|1|A|G|1800
6NU3|1|A|A|1801
6NU3|1|A|A|1802
6NU3|1|A|A|1803
*
6NU3|1|A|U|1807
6NU3|1|A|A|1808
6NU3|1|A|U|1809
6NU3|1|A|A|1810
6NU3|1|A|A|1811
6NU3|1|A|C|1812
6NU3|1|A|C|1813
6NU3|1|A|A|1814
6NU3|1|A|A|1815
6NU3|1|A|G|1816

Current chains

Chain A
16S rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain 2
39S ribosomal protein L34, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain F
39S ribosomal protein L4, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
cDNA FLJ61100, highly similar to 39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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