J4_6NU3_005

3D structure

PDB id

6NU3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into unique features of the human mitochondrial ribosome recycling

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CUG*CC*GCAAAGGUAG*UGAAUG

Length

21 nucleotides

Bulged bases

6NU3|1|A|U|2634

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6NU3_005 not in the Motif Atlas

Homologous match to J4_5J7L_026

Geometric discrepancy: 0.2065

The information below is about J4_5J7L_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_93343.1

Basepair signature

cWW-tSS-cSS-cWH-cWW-tWH-tHS-cWW-cWW-tWW-F-cSH-F-F

Number of instances in this motif group

4

Unit IDs

6NU3|1|A|C|2544
6NU3|1|A|U|2545
6NU3|1|A|G|2546
*
6NU3|1|A|C|2569
6NU3|1|A|C|2570
*
6NU3|1|A|G|2587
6NU3|1|A|C|2588
6NU3|1|A|A|2589
6NU3|1|A|A|2590
6NU3|1|A|A|2591
6NU3|1|A|G|2592
6NU3|1|A|G|2593
6NU3|1|A|U|2594
6NU3|1|A|A|2595
6NU3|1|A|G|2596
*
6NU3|1|A|U|2630
6NU3|1|A|G|2631
6NU3|1|A|A|2632
6NU3|1|A|A|2633
6NU3|1|A|U|2634
6NU3|1|A|G|2635

Current chains

Chain A

16S rRNA

Nearby chains

Chain A3

Aurora kinase A-interacting protein

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain D

39S ribosomal protein L2, mitochondrial