J4_6O7K_002
3D structure
- PDB id
- 6O7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GAG*CAUAACG*CCAAAG*UGC
- Length
- 19 nucleotides
- Bulged bases
- 6O7K|1|g|C|183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6O7K_002 not in the Motif Atlas
- Homologous match to J4_5J7L_002
- Geometric discrepancy: 0.1101
- The information below is about J4_5J7L_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_01665.1
- Basepair signature
- cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
6O7K|1|g|G|142
6O7K|1|g|A|143
6O7K|1|g|G|144
*
6O7K|1|g|C|178
6O7K|1|g|A|179
6O7K|1|g|U|180
6O7K|1|g|A|181
6O7K|1|g|A|182
6O7K|1|g|C|183
6O7K|1|g|G|184
*
6O7K|1|g|C|193
6O7K|1|g|C|194
6O7K|1|g|A|195
6O7K|1|g|A|196
6O7K|1|g|A|197
6O7K|1|g|G|198
*
6O7K|1|g|U|219
6O7K|1|g|G|220
6O7K|1|g|C|221
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain 3
- 30S ribosomal protein S20
Coloring options: