J4_6O90_012

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GAG*CAUAACAGUU*AGAGUGAAAG*CGC

Length

26 nucleotides

Bulged bases

6O90|1|a|C|189, 6O90|1|a|A|217, 6O90|1|a|A|218

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O90|1|a|G|148
6O90|1|a|A|149
6O90|1|a|G|150
*
6O90|1|a|C|184
6O90|1|a|A|185
6O90|1|a|U|186
6O90|1|a|A|187
6O90|1|a|A|188
6O90|1|a|C|189
6O90|1|a|A|190
6O90|1|a|G|191
6O90|1|a|U|192
6O90|1|a|U|193
*
6O90|1|a|A|210
6O90|1|a|G|211
6O90|1|a|A|212
6O90|1|a|G|213
6O90|1|a|U|214
6O90|1|a|G|215
6O90|1|a|A|216
6O90|1|a|A|217
6O90|1|a|A|218
6O90|1|a|G|219
*
6O90|1|a|C|234
6O90|1|a|G|235
6O90|1|a|C|236

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S20