J4_6OGG_006

3D structure

PDB id

6OGG (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GG*UUUAAG*UGAUGAC*GC

Length

17 nucleotides

Bulged bases

6OGG|1|1|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGG|1|1|G|1444
6OGG|1|1|G|1445
*
6OGG|1|1|U|1466
6OGG|1|1|U|1467
6OGG|1|1|U|1468
6OGG|1|1|A|1469
6OGG|1|1|A|1470
6OGG|1|1|G|1471
*
6OGG|1|1|U|1520
6OGG|1|1|G|1521
6OGG|1|1|A|1522
6OGG|1|1|U|1523
6OGG|1|1|G|1524
6OGG|1|1|A|1525
6OGG|1|1|C|1526
*
6OGG|1|1|G|1546
6OGG|1|1|C|1547

Current chains

Chain 1

23S ribosomal RNA

Nearby chains