J4_6OLF_011
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUGCC*GGCG*CUUAAGGUAG*UGAAUG
- Length
- 25 nucleotides
- Bulged bases
- 6OLF|1|t|U|3789
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLF|1|t|C|3667
6OLF|1|t|U|3668
6OLF|1|t|G|3669
6OLF|1|t|C|3670
6OLF|1|t|C|3671
*
6OLF|1|t|G|3721
6OLF|1|t|G|3722
6OLF|1|t|C|3723
6OLF|1|t|G|3724
*
6OLF|1|t|C|3742
6OLF|1|t|U|3743
6OLF|1|t|U|3744
6OLF|1|t|A|3745
6OLF|1|t|A|3746
6OLF|1|t|G|3747
6OLF|1|t|G|3748
6OLF|1|t|U|3749
6OLF|1|t|A|3750
6OLF|1|t|G|3751
*
6OLF|1|t|U|3785
6OLF|1|t|G|3786
6OLF|1|t|A|3787
6OLF|1|t|A|3788
6OLF|1|t|U|3789
6OLF|1|t|G|3790
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain o
- 60S ribosomal protein L41
- Chain v
- Transfer RNA; tRNA
Coloring options: