J4_6OLI_012

3D structure

PDB id

6OLI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

6OLI|1|t|A|4551

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLI|1|t|G|4549
6OLI|1|t|U|4550
6OLI|1|t|A|4551
6OLI|1|t|A|4552
*
6OLI|1|t|U|4582
6OLI|1|t|C|4583
*
6OLI|1|t|G|4638
6OLI|1|t|U|4639
6OLI|1|t|G|4640
*
6OLI|1|t|C|4674
6OLI|1|t|G|4675
6OLI|1|t|C|4676
6OLI|1|t|C|4677

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain P

60S ribosomal protein L13a

Chain W

60S ribosomal protein L23