J4_6OM7_014

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGUAA*UC*GUG*CGCCC

Length

15 nucleotides

Bulged bases

6OM7|1|t|A|4551

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM7|1|t|G|4548
6OM7|1|t|G|4549
6OM7|1|t|U|4550
6OM7|1|t|A|4551
6OM7|1|t|A|4552
*
6OM7|1|t|U|4582
6OM7|1|t|C|4583
*
6OM7|1|t|G|4638
6OM7|1|t|U|4639
6OM7|1|t|G|4640
*
6OM7|1|t|C|4674
6OM7|1|t|G|4675
6OM7|1|t|C|4676
6OM7|1|t|C|4677
6OM7|1|t|C|4678

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain P

60S ribosomal protein L13a

Chain W

60S ribosomal protein L23