J4_6Q97_007
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGGGCU*GAC*GAAG*UGCC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|1|G|2642
6Q97|1|1|G|2643
6Q97|1|1|G|2644
6Q97|1|1|G|2645
6Q97|1|1|C|2646
6Q97|1|1|U|2647
*
6Q97|1|1|G|2674
6Q97|1|1|A|2675
6Q97|1|1|C|2676
*
6Q97|1|1|G|2732
6Q97|1|1|A|2733
6Q97|1|1|A|2734
6Q97|1|1|G|2735
*
6Q97|1|1|U|2769
6Q97|1|1|G|2770
6Q97|1|1|C|2771
6Q97|1|1|C|2772
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
- Chain K
- 50S ribosomal protein L14
Coloring options: