J4_6QNR_022

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAC*GC*GG*CC

Length

9 nucleotides

Bulged bases

6QNR|1|1H|A|1492

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6QNR_022 not in the Motif Atlas

Homologous match to J4_9DFE_006

Geometric discrepancy: 0.1937

The information below is about J4_9DFE_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_75575.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

7

Unit IDs

6QNR|1|1H|G|1491
6QNR|1|1H|A|1492
6QNR|1|1H|C|1493
*
6QNR|1|1H|G|1514
6QNR|1|1H|C|1515
*
6QNR|1|1H|G|1572
6QNR|1|1H|G|1573
*
6QNR|1|1H|C|1594
6QNR|1|1H|C|1595

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains