J4_6QNR_027
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CCCGGA(4SU)AGCUC*GAGCAGG*CCGU(7MG)UCCUU*GAGUCCGGG
- Length
- 38 nucleotides
- Bulged bases
- 6QNR|1|1K|U|47
- QA status
- Modified nucleotides: 4SU, 7MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QNR|1|1K|C|2
6QNR|1|1K|C|3
6QNR|1|1K|C|4
6QNR|1|1K|G|5
6QNR|1|1K|G|6
6QNR|1|1K|A|7
6QNR|1|1K|4SU|8
6QNR|1|1K|A|9
6QNR|1|1K|G|10
6QNR|1|1K|C|11
6QNR|1|1K|U|12
6QNR|1|1K|C|13
*
6QNR|1|1K|G|22
6QNR|1|1K|A|23
6QNR|1|1K|G|24
6QNR|1|1K|C|25
6QNR|1|1K|A|26
6QNR|1|1K|G|27
6QNR|1|1K|G|28
*
6QNR|1|1K|C|42
6QNR|1|1K|C|43
6QNR|1|1K|G|44
6QNR|1|1K|U|45
6QNR|1|1K|7MG|46
6QNR|1|1K|U|47
6QNR|1|1K|C|48
6QNR|1|1K|C|49
6QNR|1|1K|U|50
6QNR|1|1K|U|51
*
6QNR|1|1K|G|63
6QNR|1|1K|A|64
6QNR|1|1K|G|65
6QNR|1|1K|U|66
6QNR|1|1K|C|67
6QNR|1|1K|C|68
6QNR|1|1K|G|69
6QNR|1|1K|G|70
6QNR|1|1K|G|71
Current chains
- Chain 1K
- E. coli tRNAPhe
Nearby chains
- Chain 13
- Small subunit ribosomal RNA; SSU rRNA
- Chain 1H
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2K
- Transfer RNA; tRNA
- Chain 88
- 50S ribosomal protein L16
Coloring options: