J4_6QTZ_006
3D structure
- PDB id
- 6QTZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GACUG*CAUAGC*GUGAUU*AUUAAC
- Length
- 23 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QTZ|1|A|G|2130
6QTZ|1|A|A|2131
6QTZ|1|A|C|2132
6QTZ|1|A|U|2133
6QTZ|1|A|G|2134
*
6QTZ|1|A|C|2146
6QTZ|1|A|A|2147
6QTZ|1|A|U|2148
6QTZ|1|A|A|2149
6QTZ|1|A|G|2150
6QTZ|1|A|C|2151
*
6QTZ|1|A|G|2185
6QTZ|1|A|U|2186
6QTZ|1|A|G|2187
6QTZ|1|A|A|2188
6QTZ|1|A|U|2189
6QTZ|1|A|U|2190
*
6QTZ|1|A|A|2317
6QTZ|1|A|U|2318
6QTZ|1|A|U|2319
6QTZ|1|A|A|2320
6QTZ|1|A|A|2321
6QTZ|1|A|C|2322
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L2-A
- Chain m
- 60S ribosomal protein L43-A
Coloring options: