3D structure

PDB id
6QTZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GACUG*CAUAGC*GUGAUU*AUUAAC
Length
23 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6QTZ|1|A|G|2130
6QTZ|1|A|A|2131
6QTZ|1|A|C|2132
6QTZ|1|A|U|2133
6QTZ|1|A|G|2134
*
6QTZ|1|A|C|2146
6QTZ|1|A|A|2147
6QTZ|1|A|U|2148
6QTZ|1|A|A|2149
6QTZ|1|A|G|2150
6QTZ|1|A|C|2151
*
6QTZ|1|A|G|2185
6QTZ|1|A|U|2186
6QTZ|1|A|G|2187
6QTZ|1|A|A|2188
6QTZ|1|A|U|2189
6QTZ|1|A|U|2190
*
6QTZ|1|A|A|2317
6QTZ|1|A|U|2318
6QTZ|1|A|U|2319
6QTZ|1|A|A|2320
6QTZ|1|A|A|2321
6QTZ|1|A|C|2322

Current chains

Chain A
25S rRNA

Nearby chains

Chain B
60S ribosomal protein L2-A
Chain m
60S ribosomal protein L43-A

Coloring options:

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