J4_6S05_004
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GG*CUUAAC*GGAAGAG*UC
- Length
- 17 nucleotides
- Bulged bases
- 6S05|1|A|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S05|1|A|G|1674
6S05|1|A|G|1675
*
6S05|1|A|C|1693
6S05|1|A|U|1694
6S05|1|A|U|1695
6S05|1|A|A|1696
6S05|1|A|A|1697
6S05|1|A|C|1698
*
6S05|1|A|G|1747
6S05|1|A|G|1748
6S05|1|A|A|1749
6S05|1|A|A|1750
6S05|1|A|G|1751
6S05|1|A|A|1752
6S05|1|A|G|1753
*
6S05|1|A|U|1772
6S05|1|A|C|1773
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain V
- 60S ribosomal protein L22-A
- Chain g
- 60S ribosomal protein L34-A
- Chain j
- 60S ribosomal protein L38
Coloring options: