J4_6S0X_008

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GAGCUGU*AUGGACA*UGGACG*CCC

Length

23 nucleotides

Bulged bases

6S0X|1|A|G|2672, 6S0X|1|A|A|2760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0X|1|A|G|2670
6S0X|1|A|A|2671
6S0X|1|A|G|2672
6S0X|1|A|C|2673
6S0X|1|A|U|2674
6S0X|1|A|G|2675
6S0X|1|A|U|2676
*
6S0X|1|A|A|2698
6S0X|1|A|U|2699
6S0X|1|A|G|2700
6S0X|1|A|G|2701
6S0X|1|A|A|2702
6S0X|1|A|C|2703
6S0X|1|A|A|2704
*
6S0X|1|A|U|2757
6S0X|1|A|G|2758
6S0X|1|A|G|2759
6S0X|1|A|A|2760
6S0X|1|A|C|2761
6S0X|1|A|G|2762
*
6S0X|1|A|C|2796
6S0X|1|A|C|2797
6S0X|1|A|C|2798

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain H

50S ribosomal protein L13

Chain I

50S ribosomal protein L14