J4_6S0X_010

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GAC*GAUAAUAUU*AAAGUGAAAG*UCAC

Length

26 nucleotides

Bulged bases

6S0X|1|a|U|183

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S0X|1|a|G|142
6S0X|1|a|A|143
6S0X|1|a|C|144
*
6S0X|1|a|G|178
6S0X|1|a|A|179
6S0X|1|a|U|180
6S0X|1|a|A|181
6S0X|1|a|A|182
6S0X|1|a|U|183
6S0X|1|a|A|184
6S0X|1|a|U|185
6S0X|1|a|U|186
*
6S0X|1|a|A|204
6S0X|1|a|A|205
6S0X|1|a|A|206
6S0X|1|a|G|207
6S0X|1|a|U|208
6S0X|1|a|G|209
6S0X|1|a|A|210
6S0X|1|a|A|211
6S0X|1|a|A|212
6S0X|1|a|G|213
*
6S0X|1|a|U|226
6S0X|1|a|C|227
6S0X|1|a|A|228
6S0X|1|a|C|229

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20