J4_6S12_002

3D structure

PDB id

6S12 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACGAAU*AAUC*GAA*UGUAGU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S12|1|A|A|339
6S12|1|A|C|340
6S12|1|A|G|341
6S12|1|A|A|342
6S12|1|A|A|343
6S12|1|A|U|344
*
6S12|1|A|A|359
6S12|1|A|A|360
6S12|1|A|U|361
6S12|1|A|C|362
*
6S12|1|A|G|366
6S12|1|A|A|367
6S12|1|A|A|368
*
6S12|1|A|U|380
6S12|1|A|G|381
6S12|1|A|U|382
6S12|1|A|A|383
6S12|1|A|G|384
6S12|1|A|U|385

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain S

50S ribosomal protein L24