J4_6S12_007

3D structure

PDB id

6S12 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGC*GCG*CCUAAGGUAGC*GCACGAAAG

Length

27 nucleotides

Bulged bases

6S12|1|A|A|1998

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S12|1|A|C|1860
6S12|1|A|U|1861
6S12|1|A|G|1862
6S12|1|A|C|1863
*
6S12|1|A|G|1931
6S12|1|A|C|1932
6S12|1|A|G|1933
*
6S12|1|A|C|1951
6S12|1|A|C|1952
6S12|1|A|U|1953
6S12|1|A|A|1954
6S12|1|A|A|1955
6S12|1|A|G|1956
6S12|1|A|G|1957
6S12|1|A|U|1958
6S12|1|A|A|1959
6S12|1|A|G|1960
6S12|1|A|C|1961
*
6S12|1|A|G|1991
6S12|1|A|C|1992
6S12|1|A|A|1993
6S12|1|A|C|1994
6S12|1|A|G|1995
6S12|1|A|A|1996
6S12|1|A|A|1997
6S12|1|A|A|1998
6S12|1|A|G|1999

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2