J4_6SJ6_003

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GUC*GAUAA*UACC*GC

Length

14 nucleotides

Bulged bases

6SJ6|1|A|A|1421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|G|1385
6SJ6|1|A|U|1386
6SJ6|1|A|C|1387
*
6SJ6|1|A|G|1418
6SJ6|1|A|A|1419
6SJ6|1|A|U|1420
6SJ6|1|A|A|1421
6SJ6|1|A|A|1422
*
6SJ6|1|A|U|1439
6SJ6|1|A|A|1440
6SJ6|1|A|C|1441
6SJ6|1|A|C|1442
*
6SJ6|1|A|G|1641
6SJ6|1|A|C|1642

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain W

50S ribosomal protein L23