J4_6SJ6_006

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GACUG*CACAG*UGACG*CGUAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|G|1799
6SJ6|1|A|A|1800
6SJ6|1|A|C|1801
6SJ6|1|A|U|1802
6SJ6|1|A|G|1803
*
6SJ6|1|A|C|1815
6SJ6|1|A|A|1816
6SJ6|1|A|C|1817
6SJ6|1|A|A|1818
6SJ6|1|A|G|1819
*
6SJ6|1|A|U|1854
6SJ6|1|A|G|1855
6SJ6|1|A|A|1856
6SJ6|1|A|C|1857
6SJ6|1|A|G|1858
*
6SJ6|1|A|C|2001
6SJ6|1|A|G|2002
6SJ6|1|A|U|2003
6SJ6|1|A|A|2004
6SJ6|1|A|A|2005
6SJ6|1|A|C|2006

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L2