J4_6SPG_015

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

UG*CAUACGU*AGAAAG*CG

Length

17 nucleotides

Bulged bases

6SPG|1|a|A|191

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPG|1|a|U|137
6SPG|1|a|G|138
*
6SPG|1|a|C|172
6SPG|1|a|A|173
6SPG|1|a|U|174
6SPG|1|a|A|175
6SPG|1|a|C|176
6SPG|1|a|G|177
6SPG|1|a|U|178
*
6SPG|1|a|A|187
6SPG|1|a|G|188
6SPG|1|a|A|189
6SPG|1|a|A|190
6SPG|1|a|A|191
6SPG|1|a|G|192
*
6SPG|1|a|C|213
6SPG|1|a|G|214

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20