J4_6T59_006

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

6T59|1|54|A|2696

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T59|1|54|G|2618
6T59|1|54|G|2619
*
6T59|1|54|U|2637
6T59|1|54|G|2638
6T59|1|54|U|2639
6T59|1|54|G|2640
6T59|1|54|A|2641
6T59|1|54|A|2642
*
6T59|1|54|U|2692
6T59|1|54|G|2693
6T59|1|54|G|2694
6T59|1|54|A|2695
6T59|1|54|A|2696
6T59|1|54|A|2697
6T59|1|54|G|2698
*
6T59|1|54|U|2718
6T59|1|54|C|2719

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain R3

eL19

Chain U3

eL22

Chain g3

eL34

Chain k3

eL38