J4_6T83_014
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UC*GAGUCG*CUAAGUG*UAAA
- Length
- 19 nucleotides
- Bulged bases
- 6T83|1|Aa|U|298
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6T83_014 not in the Motif Atlas
- Homologous match to J4_8P9A_012
- Geometric discrepancy: 0.1239
- The information below is about J4_8P9A_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_45801.6
- Basepair signature
- cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6T83|1|Aa|U|112
6T83|1|Aa|C|113
*
6T83|1|Aa|G|267
6T83|1|Aa|A|268
6T83|1|Aa|G|269
6T83|1|Aa|U|270
6T83|1|Aa|C|271
6T83|1|Aa|G|272
*
6T83|1|Aa|C|293
6T83|1|Aa|U|294
6T83|1|Aa|A|295
6T83|1|Aa|A|296
6T83|1|Aa|G|297
6T83|1|Aa|U|298
6T83|1|Aa|G|299
*
6T83|1|Aa|U|316
6T83|1|Aa|A|317
6T83|1|Aa|A|318
6T83|1|Aa|A|319
Current chains
- Chain Aa
- 25S rRNA
Nearby chains
- Chain Na
- 60S ribosomal protein L13-A
- Chain Pa
- 60S ribosomal protein L15-A
- Chain S
- 60S ribosomal protein L35-A
- Chain T
- 60S ribosomal protein L36-A
Coloring options: