J4_6W6L_004
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 6W6L|1|t|C|2416
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6W6L|1|t|G|2385
6W6L|1|t|G|2386
6W6L|1|t|U|2387
6W6L|1|t|U|2388
6W6L|1|t|C|2389
*
6W6L|1|t|G|2413
6W6L|1|t|G|2414
6W6L|1|t|U|2415
6W6L|1|t|C|2416
6W6L|1|t|A|2417
6W6L|1|t|G|2418
*
6W6L|1|t|U|2517
6W6L|1|t|C|2518
*
6W6L|1|t|G|2756
6W6L|1|t|G|2757
6W6L|1|t|C|2758
6W6L|1|t|C|2759
6W6L|1|t|G|2760
6W6L|1|t|U|2761
6W6L|1|t|A|2762
6W6L|1|t|C|2763
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain 1
- Protein transport protein Sec61 subunit alpha isoform 1
- Chain D
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain S
- 60S ribosomal protein L19
- Chain Y
- 60S ribosomal protein L23a
- Chain h
- 60S ribosomal protein L34
- Chain i
- 60S ribosomal protein L35
- Chain k
- 60S ribosomal protein L37
- Chain l
- 60S ribosomal protein L38
- Chain m
- 60S ribosomal protein L39
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