J4_6W6L_013
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- CUC*GCCGG*CCACGCGCGCGU*GACGGCGGAGAG
- Length
- 32 nucleotides
- Bulged bases
- 6W6L|1|t|C|1220, 6W6L|1|t|G|1248
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6W6L|1|t|C|968
6W6L|1|t|U|969
6W6L|1|t|C|970
*
6W6L|1|t|G|1053
6W6L|1|t|C|1054
6W6L|1|t|C|1055
6W6L|1|t|G|1056
6W6L|1|t|G|1057
*
6W6L|1|t|C|1219
6W6L|1|t|C|1220
6W6L|1|t|A|1221
6W6L|1|t|C|1222
6W6L|1|t|G|1223
6W6L|1|t|C|1224
6W6L|1|t|G|1225
6W6L|1|t|C|1226
6W6L|1|t|G|1227
6W6L|1|t|C|1228
6W6L|1|t|G|1229
6W6L|1|t|U|1230
*
6W6L|1|t|G|1245
6W6L|1|t|A|1246
6W6L|1|t|C|1247
6W6L|1|t|G|1248
6W6L|1|t|G|1249
6W6L|1|t|C|1250
6W6L|1|t|G|1251
6W6L|1|t|G|1252
6W6L|1|t|A|1253
6W6L|1|t|G|1256
6W6L|1|t|A|1257
6W6L|1|t|G|1258
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain G
- 60S ribosomal protein L6
- Chain H
- 60S ribosomal protein L7
- Chain c
- 60S ribosomal protein L29
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