J4_6W6P_006
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UC*GGUUAG*CC*GCCCGUA
- Length
- 17 nucleotides
- Bulged bases
- 6W6P|1|A|U|1377
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6W6P_006 not in the Motif Atlas
- Homologous match to J4_4WF9_006
- Geometric discrepancy: 0.1041
- The information below is about J4_4WF9_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_48150.2
- Basepair signature
- cWW-cWW-tHW-F-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
6W6P|1|A|U|1349
6W6P|1|A|C|1350
*
6W6P|1|A|G|1374
6W6P|1|A|G|1375
6W6P|1|A|U|1376
6W6P|1|A|U|1377
6W6P|1|A|A|1378
6W6P|1|A|G|1379
*
6W6P|1|A|C|1440
6W6P|1|A|C|1441
*
6W6P|1|A|G|1640
6W6P|1|A|C|1641
6W6P|1|A|C|1642
6W6P|1|A|C|1643
6W6P|1|A|G|1644
6W6P|1|A|U|1645
6W6P|1|A|A|1646
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L34
- Chain U
- 50S ribosomal protein L23
Coloring options: