J4_6W6P_007

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GACUG*CACAG*UGACG*CGUAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6P|1|A|G|1786
6W6P|1|A|A|1787
6W6P|1|A|C|1788
6W6P|1|A|U|1789
6W6P|1|A|G|1790
*
6W6P|1|A|C|1802
6W6P|1|A|A|1803
6W6P|1|A|C|1804
6W6P|1|A|A|1805
6W6P|1|A|G|1806
*
6W6P|1|A|U|1841
6W6P|1|A|G|1842
6W6P|1|A|A|1843
6W6P|1|A|C|1844
6W6P|1|A|G|1845
*
6W6P|1|A|C|1988
6W6P|1|A|G|1989
6W6P|1|A|U|1990
6W6P|1|A|A|1991
6W6P|1|A|A|1992
6W6P|1|A|C|1993

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA