3D structure

PDB id
6W6P (explore in PDB, NAKB, or RNA 3D Hub)
Description
MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GAGUAACAC*GGU*AUAG*CC
Length
18 nucleotides
Bulged bases
6W6P|1|a|C|126
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6W6P|1|a|G|120
6W6P|1|a|A|121
6W6P|1|a|G|122
6W6P|1|a|U|123
6W6P|1|a|A|124
6W6P|1|a|A|125
6W6P|1|a|C|126
6W6P|1|a|A|127
6W6P|1|a|C|128
*
6W6P|1|a|G|253
6W6P|1|a|G|254
6W6P|1|a|U|255
*
6W6P|1|a|A|301
6W6P|1|a|U|302
6W6P|1|a|A|303
6W6P|1|a|G|304
*
6W6P|1|a|C|326
6W6P|1|a|C|327

Current chains

Chain a
16S rRNA

Nearby chains

Chain l
30S ribosomal protein S12
Chain p
30S ribosomal protein S16
Chain q
30S ribosomal protein S17

Coloring options:

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