J4_6W6P_012

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAG*CAUAACAGU*GAGUGAAAG*CGC

Length

24 nucleotides

Bulged bases

6W6P|1|a|C|189

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6P|1|a|G|148
6W6P|1|a|A|149
6W6P|1|a|G|150
*
6W6P|1|a|C|184
6W6P|1|a|A|185
6W6P|1|a|U|186
6W6P|1|a|A|187
6W6P|1|a|A|188
6W6P|1|a|C|189
6W6P|1|a|A|190
6W6P|1|a|G|191
6W6P|1|a|U|192
*
6W6P|1|a|G|211
6W6P|1|a|A|212
6W6P|1|a|G|213
6W6P|1|a|U|214
6W6P|1|a|G|215
6W6P|1|a|A|216
6W6P|1|a|A|217
6W6P|1|a|A|218
6W6P|1|a|G|219
*
6W6P|1|a|C|234
6W6P|1|a|G|235
6W6P|1|a|C|236

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S20