J4_6WQN_001
3D structure
- PDB id
- 6WQN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GAGUAC*GGAAUCUG*UAAG
- Length
- 20 nucleotides
- Bulged bases
- 6WQN|1|1|U|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6WQN_001 not in the Motif Atlas
- Homologous match to J4_4WF9_001
- Geometric discrepancy: 0.1244
- The information below is about J4_4WF9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_94698.1
- Basepair signature
- cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
6WQN|1|1|C|271
6WQN|1|1|C|272
*
6WQN|1|1|G|416
6WQN|1|1|A|417
6WQN|1|1|G|418
6WQN|1|1|U|419
6WQN|1|1|A|420
6WQN|1|1|C|421
*
6WQN|1|1|G|445
6WQN|1|1|G|446
6WQN|1|1|A|447
6WQN|1|1|A|448
6WQN|1|1|U|449
6WQN|1|1|C|450
6WQN|1|1|U|451
6WQN|1|1|G|452
*
6WQN|1|1|U|467
6WQN|1|1|A|468
6WQN|1|1|A|469
6WQN|1|1|G|470
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain J
- 50S ribosomal protein L28
Coloring options: