J4_6WQQ_009

3D structure

PDB id

6WQQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAGC*GAC*GGACG*CCCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WQQ|1|1|G|2669
6WQQ|1|1|G|2670
6WQQ|1|1|A|2671
6WQQ|1|1|G|2672
6WQQ|1|1|C|2673
*
6WQQ|1|1|G|2701
6WQQ|1|1|A|2702
6WQQ|1|1|C|2703
*
6WQQ|1|1|G|2758
6WQQ|1|1|G|2759
6WQQ|1|1|A|2760
6WQQ|1|1|C|2761
6WQQ|1|1|G|2762
*
6WQQ|1|1|C|2796
6WQQ|1|1|C|2797
6WQQ|1|1|C|2798
6WQQ|1|1|C|2799

Current chains

Chain 1

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L3

Chain V

50S ribosomal protein L13

Chain W

50S ribosomal protein L14