J4_6XIQ_006
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GG*CUUAAC*GGAAGAGG*CUC
- Length
- 19 nucleotides
- Bulged bases
- 6XIQ|1|1|G|1751, 6XIQ|1|1|A|1752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XIQ|1|1|G|1674
6XIQ|1|1|G|1675
*
6XIQ|1|1|C|1693
6XIQ|1|1|U|1694
6XIQ|1|1|U|1695
6XIQ|1|1|A|1696
6XIQ|1|1|A|1697
6XIQ|1|1|C|1698
*
6XIQ|1|1|G|1747
6XIQ|1|1|G|1748
6XIQ|1|1|A|1749
6XIQ|1|1|A|1750
6XIQ|1|1|G|1751
6XIQ|1|1|A|1752
6XIQ|1|1|G|1753
6XIQ|1|1|G|1754
*
6XIQ|1|1|C|1771
6XIQ|1|1|U|1772
6XIQ|1|1|C|1773
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L19-A
- Chain U
- 60S ribosomal protein L22-A
- Chain g
- 60S ribosomal protein L34-A
- Chain k
- RPL38 isoform 1
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