J4_6ZTM_016
3D structure
- PDB id
- 6ZTM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in collided state without NusG
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGGC*GAC*GGAAG*UGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6ZTM_016 not in the Motif Atlas
- Homologous match to J4_5J7L_028
- Geometric discrepancy: 0.0744
- The information below is about J4_5J7L_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_77044.4
- Basepair signature
- cWW-F-tHS-F-cWW-cWW-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
6ZTM|1|BA|G|2643
6ZTM|1|BA|G|2644
6ZTM|1|BA|G|2645
6ZTM|1|BA|C|2646
*
6ZTM|1|BA|G|2674
6ZTM|1|BA|A|2675
6ZTM|1|BA|C|2676
*
6ZTM|1|BA|G|2731
6ZTM|1|BA|G|2732
6ZTM|1|BA|A|2733
6ZTM|1|BA|A|2734
6ZTM|1|BA|G|2735
*
6ZTM|1|BA|U|2769
6ZTM|1|BA|G|2770
6ZTM|1|BA|C|2771
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BD
- 50S ribosomal protein L3
- Chain BK
- 50S ribosomal protein L13
- Chain BL
- 50S ribosomal protein L14
Coloring options: