3D structure

PDB id
6ZTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 6
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAG*CAUAACG*CCAAAG*UGC
Length
19 nucleotides
Bulged bases
6ZTP|1|AA|C|183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_6ZTP_002 not in the Motif Atlas
Homologous match to J4_5J7L_002
Geometric discrepancy: 0.1344
The information below is about J4_5J7L_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_01665.1
Basepair signature
cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW
Number of instances in this motif group
1

Unit IDs

6ZTP|1|AA|G|142
6ZTP|1|AA|A|143
6ZTP|1|AA|G|144
*
6ZTP|1|AA|C|178
6ZTP|1|AA|A|179
6ZTP|1|AA|U|180
6ZTP|1|AA|A|181
6ZTP|1|AA|A|182
6ZTP|1|AA|C|183
6ZTP|1|AA|G|184
*
6ZTP|1|AA|C|193
6ZTP|1|AA|C|194
6ZTP|1|AA|A|195
6ZTP|1|AA|A|196
6ZTP|1|AA|A|197
6ZTP|1|AA|G|198
*
6ZTP|1|AA|U|219
6ZTP|1|AA|G|220
6ZTP|1|AA|C|221

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AT
30S ribosomal protein S20

Coloring options:


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