3D structure

PDB id
6ZTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 6
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGAUAAA*UC*GCUU*AG
Length
15 nucleotides
Bulged bases
6ZTP|1|BA|G|1271, 6ZTP|1|BA|A|1272, 6ZTP|1|BA|U|1273, 6ZTP|1|BA|U|1647
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_6ZTP_009 not in the Motif Atlas
Homologous match to J4_5J7L_021
Geometric discrepancy: 0.07
The information below is about J4_5J7L_021
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_64571.5
Basepair signature
cWW-F-cWW-tSS-cWW-F-cWW
Number of instances in this motif group
4

Unit IDs

6ZTP|1|BA|C|1270
6ZTP|1|BA|G|1271
6ZTP|1|BA|A|1272
6ZTP|1|BA|U|1273
6ZTP|1|BA|A|1274
6ZTP|1|BA|A|1275
6ZTP|1|BA|A|1276
*
6ZTP|1|BA|U|1294
6ZTP|1|BA|C|1295
*
6ZTP|1|BA|G|1645
6ZTP|1|BA|C|1646
6ZTP|1|BA|U|1647
6ZTP|1|BA|U|1648
*
6ZTP|1|BA|A|2009
6ZTP|1|BA|G|2010

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B2
50S ribosomal protein L32
Chain BO
50S ribosomal protein L17
Chain BT
50S ribosomal protein L22

Coloring options:


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