J4_6ZU5_011

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAGUAGGAC*GGC*GUGAC*GG

Length

19 nucleotides

Bulged bases

6ZU5|1|S60|G|94, 6ZU5|1|S60|G|268

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZU5|1|S60|C|88
6ZU5|1|S60|A|89
6ZU5|1|S60|G|90
6ZU5|1|S60|U|91
6ZU5|1|S60|A|92
6ZU5|1|S60|G|93
6ZU5|1|S60|G|94
6ZU5|1|S60|A|95
6ZU5|1|S60|C|96
*
6ZU5|1|S60|G|218
6ZU5|1|S60|G|219
6ZU5|1|S60|C|220
*
6ZU5|1|S60|G|266
6ZU5|1|S60|U|267
6ZU5|1|S60|G|268
6ZU5|1|S60|A|269
6ZU5|1|S60|C|270
*
6ZU5|1|S60|G|292
6ZU5|1|S60|G|293

Current chains

Chain S60

18S rRNA

Nearby chains

Chain SE0

eS4

Chain SI0

eS8

Chain SL0

uS17

Chain SX0

uS12