J4_6ZU5_014
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACG*CGAAGG*CAGUAAACGAUG*CU
- Length
- 23 nucleotides
- Bulged bases
- 6ZU5|1|S60|C|499, 6ZU5|1|S60|A|737, 6ZU5|1|S60|C|739, 6ZU5|1|S60|A|741
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZU5|1|S60|A|498
6ZU5|1|S60|C|499
6ZU5|1|S60|G|500
*
6ZU5|1|S60|C|686
6ZU5|1|S60|G|687
6ZU5|1|S60|A|688
6ZU5|1|S60|A|689
6ZU5|1|S60|G|690
6ZU5|1|S60|G|691
*
6ZU5|1|S60|C|732
6ZU5|1|S60|A|733
6ZU5|1|S60|G|734
6ZU5|1|S60|U|735
6ZU5|1|S60|A|736
6ZU5|1|S60|A|737
6ZU5|1|S60|A|738
6ZU5|1|S60|C|739
6ZU5|1|S60|G|740
6ZU5|1|S60|A|741
6ZU5|1|S60|U|742
6ZU5|1|S60|G|743
*
6ZU5|1|S60|C|796
6ZU5|1|S60|U|797
Current chains
- Chain S60
- 18S rRNA
Nearby chains
- Chain L50
- Large subunit ribosomal RNA; LSU rRNA
- Chain LPP
- eL43
- Chain SAA
- eS26
- Chain SL0
- uS17
- Chain SN0
- uS15
- Chain SO0
- uS11
- Chain SW0
- uS8
- Chain SX0
- uS12
Coloring options: