J4_7A0S_009

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CAAAG*UUGAC*GGG*CGG

Length

16 nucleotides

Bulged bases

7A0S|1|X|A|2265, 7A0S|1|X|A|2267

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_04930.6

Basepair signature

cWW-F-F-tWW-tHH-cWW-cWW-cHW-cWW

Number of instances in this motif group

7

Unit IDs

7A0S|1|X|C|2264
7A0S|1|X|A|2265
7A0S|1|X|A|2266
7A0S|1|X|A|2267
7A0S|1|X|G|2268
*
7A0S|1|X|U|2322
7A0S|1|X|U|2323
7A0S|1|X|G|2324
7A0S|1|X|A|2325
7A0S|1|X|C|2326
*
7A0S|1|X|G|2349
7A0S|1|X|G|2350
7A0S|1|X|G|2351
*
7A0S|1|X|C|2360
7A0S|1|X|G|2361
7A0S|1|X|G|2362

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain 1

50S ribosomal protein L33

Chain 3

50S ribosomal protein L35

Chain T

50S ribosomal protein L27