J4_7A5F_002

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

UAAGCCUGCG*CAAUUAAC*GUCAACC*GCA

Length

28 nucleotides

Bulged bases

7A5F|1|A3|U|2372, 7A5F|1|A3|A|2374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7A5F|1|A3|U|2336
7A5F|1|A3|A|2337
7A5F|1|A3|A|2338
7A5F|1|A3|G|2339
7A5F|1|A3|C|2340
7A5F|1|A3|C|2341
7A5F|1|A3|U|2342
7A5F|1|A3|G|2343
7A5F|1|A3|C|2344
7A5F|1|A3|G|2345
*
7A5F|1|A3|C|2368
7A5F|1|A3|A|2369
7A5F|1|A3|A|2370
7A5F|1|A3|U|2371
7A5F|1|A3|U|2372
7A5F|1|A3|A|2373
7A5F|1|A3|A|2374
7A5F|1|A3|C|2375
*
7A5F|1|A3|G|2421
7A5F|1|A3|U|2422
7A5F|1|A3|C|2423
7A5F|1|A3|A|2424
7A5F|1|A3|A|2425
7A5F|1|A3|C|2426
7A5F|1|A3|C|2427
*
7A5F|1|A3|G|2436
7A5F|1|A3|C|2437
7A5F|1|A3|A|2438

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 23

39S ribosomal protein L34, mitochondrial

Chain 93

39S ribosomal protein L41, mitochondrial

Chain U3

39S ribosomal protein L23, mitochondrial

Chain Y3

39S ribosomal protein L47, mitochondrial

Chain s3

39S ribosomal protein S30, mitochondrial,39S ribosomal protein S30, mitochondrial,39S ribosomal protein S30, mitochondrial,mL65