J4_7ACJ_013

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

7ACJ|1|2|C|183, 7ACJ|1|2|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ACJ|1|2|G|142
7ACJ|1|2|A|143
7ACJ|1|2|G|144
7ACJ|1|2|G|145
7ACJ|1|2|G|146
*
7ACJ|1|2|C|176
7ACJ|1|2|G|177
7ACJ|1|2|C|178
7ACJ|1|2|A|179
7ACJ|1|2|U|180
7ACJ|1|2|A|181
7ACJ|1|2|A|182
7ACJ|1|2|C|183
7ACJ|1|2|G|184
*
7ACJ|1|2|C|193
7ACJ|1|2|C|194
7ACJ|1|2|A|195
7ACJ|1|2|A|196
7ACJ|1|2|A|197
7ACJ|1|2|G|198
*
7ACJ|1|2|U|219
7ACJ|1|2|G|220
7ACJ|1|2|C|221

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20