J4_7AQD_003
3D structure
- PDB id
- 7AQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial RQC complex (Translocating State)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAAG*CGCAG*CGAG*CGCAUGAG
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7AQD_003 not in the Motif Atlas
- Homologous match to J4_5J7L_020
- Geometric discrepancy: 0.4557
- The information below is about J4_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7AQD|1|A|C|645
7AQD|1|A|A|646
7AQD|1|A|A|647
7AQD|1|A|G|648
*
7AQD|1|A|C|670
7AQD|1|A|G|671
7AQD|1|A|C|672
7AQD|1|A|A|673
7AQD|1|A|G|674
*
7AQD|1|A|C|681
7AQD|1|A|G|682
7AQD|1|A|A|683
7AQD|1|A|G|684
*
7AQD|1|A|C|696
7AQD|1|A|G|697
7AQD|1|A|C|698
7AQD|1|A|A|699
7AQD|1|A|U|700
7AQD|1|A|G|701
7AQD|1|A|A|702
7AQD|1|A|G|703
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain e
- 50S ribosomal protein L35
Coloring options: