J4_7ASN_006

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GCGACUG*CACAG*UGAC*GUAACGAU

Length

24 nucleotides

Bulged bases

7ASN|1|A|G|1799, 7ASN|1|A|A|2008

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASN|1|A|G|1797
7ASN|1|A|C|1798
7ASN|1|A|G|1799
7ASN|1|A|A|1800
7ASN|1|A|C|1801
7ASN|1|A|U|1802
7ASN|1|A|G|1803
*
7ASN|1|A|C|1815
7ASN|1|A|A|1816
7ASN|1|A|C|1817
7ASN|1|A|A|1818
7ASN|1|A|G|1819
*
7ASN|1|A|U|1854
7ASN|1|A|G|1855
7ASN|1|A|A|1856
7ASN|1|A|C|1857
*
7ASN|1|A|G|2002
7ASN|1|A|U|2003
7ASN|1|A|A|2004
7ASN|1|A|A|2005
7ASN|1|A|C|2006
7ASN|1|A|G|2007
7ASN|1|A|A|2008
7ASN|1|A|U|2009

Current chains

Chain A

23S

Nearby chains

Chain F

50S ribosomal protein L2