J4_7ASN_007

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CGCCCGGUGCUGGAAGGUUAAGAGGAG*CGAAUCGAAGCCCCAGUAAACGGCGG*UCCUAAGGUAGC*GCACGAAAG

Length

74 nucleotides

Bulged bases

7ASN|1|A|G|1867, 7ASN|1|A|U|1868, 7ASN|1|A|U|1871, 7ASN|1|A|G|1872, 7ASN|1|A|G|1873, 7ASN|1|A|C|1921, 7ASN|1|A|C|1922, 7ASN|1|A|A|1923, 7ASN|1|A|G|1924, 7ASN|1|A|A|1998

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASN|1|A|C|1860
7ASN|1|A|G|1862
7ASN|1|A|C|1863
7ASN|1|A|C|1864
7ASN|1|A|C|1865
7ASN|1|A|G|1866
7ASN|1|A|G|1867
7ASN|1|A|U|1868
7ASN|1|A|G|1869
7ASN|1|A|C|1870
7ASN|1|A|U|1871
7ASN|1|A|G|1872
7ASN|1|A|G|1873
7ASN|1|A|A|1874
7ASN|1|A|A|1875
7ASN|1|A|G|1876
7ASN|1|A|G|1877
7ASN|1|A|U|1878
7ASN|1|A|U|1879
7ASN|1|A|A|1880
7ASN|1|A|A|1881
7ASN|1|A|G|1882
7ASN|1|A|A|1883
7ASN|1|A|G|1884
7ASN|1|A|G|1885
7ASN|1|A|A|1886
7ASN|1|A|G|1887
*
7ASN|1|A|C|1909
7ASN|1|A|G|1910
7ASN|1|A|A|1911
7ASN|1|A|A|1912
7ASN|1|A|U|1913
7ASN|1|A|C|1914
7ASN|1|A|G|1915
7ASN|1|A|A|1916
7ASN|1|A|A|1917
7ASN|1|A|G|1918
7ASN|1|A|C|1919
7ASN|1|A|C|1920
7ASN|1|A|C|1921
7ASN|1|A|C|1922
7ASN|1|A|A|1923
7ASN|1|A|G|1924
7ASN|1|A|U|1925
7ASN|1|A|A|1926
7ASN|1|A|A|1927
7ASN|1|A|A|1928
7ASN|1|A|C|1929
7ASN|1|A|G|1930
7ASN|1|A|G|1931
7ASN|1|A|C|1932
7ASN|1|A|G|1933
7ASN|1|A|G|1934
*
7ASN|1|A|U|1950
7ASN|1|A|C|1951
7ASN|1|A|C|1952
7ASN|1|A|U|1953
7ASN|1|A|A|1954
7ASN|1|A|A|1955
7ASN|1|A|G|1956
7ASN|1|A|G|1957
7ASN|1|A|U|1958
7ASN|1|A|A|1959
7ASN|1|A|G|1960
7ASN|1|A|C|1961
*
7ASN|1|A|G|1991
7ASN|1|A|C|1992
7ASN|1|A|A|1993
7ASN|1|A|C|1994
7ASN|1|A|G|1995
7ASN|1|A|A|1996
7ASN|1|A|A|1997
7ASN|1|A|A|1998
7ASN|1|A|G|1999

Current chains

Chain A

23S

Nearby chains

Chain F

50S ribosomal protein L2