J4_7ASO_001

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CAUGCAAGUC*GGCGGACGGGU*ACAC*GACUCCUACGGGAGGCAGCAG

Length

46 nucleotides

Bulged bases

7ASO|1|X|A|352, 7ASO|1|X|C|353, 7ASO|1|X|A|361

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASO|1|X|C|55
7ASO|1|X|A|56
7ASO|1|X|U|57
7ASO|1|X|G|58
7ASO|1|X|C|59
7ASO|1|X|A|60
7ASO|1|X|A|61
7ASO|1|X|G|62
7ASO|1|X|U|63
7ASO|1|X|C|64
*
7ASO|1|X|G|103
7ASO|1|X|G|104
7ASO|1|X|C|105
7ASO|1|X|G|106
7ASO|1|X|G|107
7ASO|1|X|A|108
7ASO|1|X|C|109
7ASO|1|X|G|110
7ASO|1|X|G|111
7ASO|1|X|G|112
7ASO|1|X|U|113
*
7ASO|1|X|A|321
7ASO|1|X|C|322
7ASO|1|X|A|323
7ASO|1|X|C|324
*
7ASO|1|X|G|345
7ASO|1|X|A|346
7ASO|1|X|C|347
7ASO|1|X|U|348
7ASO|1|X|C|349
7ASO|1|X|C|350
7ASO|1|X|U|351
7ASO|1|X|A|352
7ASO|1|X|C|353
7ASO|1|X|G|354
7ASO|1|X|G|355
7ASO|1|X|G|356
7ASO|1|X|A|357
7ASO|1|X|G|358
7ASO|1|X|G|359
7ASO|1|X|C|360
7ASO|1|X|A|361
7ASO|1|X|G|362
7ASO|1|X|C|363
7ASO|1|X|A|364
7ASO|1|X|G|365

Current chains

Chain X

16S

Nearby chains

Chain 7

30S ribosomal protein S16

Chain A

30S ribosomal protein S20

Chain N

50S ribosomal protein L14