J4_7ASO_002

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GAGUAACACGU*GCGCU*AUAG*CC

Length

22 nucleotides

Bulged bases

7ASO|1|X|C|120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASO|1|X|G|114
7ASO|1|X|A|115
7ASO|1|X|G|116
7ASO|1|X|U|117
7ASO|1|X|A|118
7ASO|1|X|A|119
7ASO|1|X|C|120
7ASO|1|X|A|121
7ASO|1|X|C|122
7ASO|1|X|G|123
7ASO|1|X|U|124
*
7ASO|1|X|G|244
7ASO|1|X|C|245
7ASO|1|X|G|246
7ASO|1|X|C|247
7ASO|1|X|U|248
*
7ASO|1|X|A|294
7ASO|1|X|U|295
7ASO|1|X|A|296
7ASO|1|X|G|297
*
7ASO|1|X|C|319
7ASO|1|X|C|320

Current chains

Chain X

16S

Nearby chains

Chain 3

30S ribosomal protein S12

Chain 7

30S ribosomal protein S16

Chain 8

30S ribosomal protein S17