J4_7ASO_003
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAAAUCUUGACAUC*GACAG*CUUAUGAUUUGGGCUACACACGUGCUACAAUGGACAAUACAAAGGGCAGCGAAACCGCGAGGUCAAGCAAUCCCAUAAAGUUGUUCUCAGUUC*GCUGGAAUCG
- Length
- 167 nucleotides
- Bulged bases
- 7ASO|1|X|G|952, 7ASO|1|X|G|954, 7ASO|1|X|A|968, 7ASO|1|X|G|976, 7ASO|1|X|A|985, 7ASO|1|X|G|986, 7ASO|1|X|U|1002, 7ASO|1|X|A|1249, 7ASO|1|X|U|1251, 7ASO|1|X|C|1255, 7ASO|1|X|A|1256, 7ASO|1|X|U|1258, 7ASO|1|X|C|1267, 7ASO|1|X|A|1268, 7ASO|1|X|G|1277, 7ASO|1|X|A|1280, 7ASO|1|X|C|1284, 7ASO|1|X|C|1288, 7ASO|1|X|A|1291, 7ASO|1|X|A|1296, 7ASO|1|X|U|1297, 7ASO|1|X|U|1308, 7ASO|1|X|C|1309, 7ASO|1|X|U|1313, 7ASO|1|X|A|1350, 7ASO|1|X|U|1352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ASO|1|X|C|950
7ASO|1|X|G|951
7ASO|1|X|G|952
7ASO|1|X|U|953
7ASO|1|X|G|954
7ASO|1|X|G|955
7ASO|1|X|A|956
7ASO|1|X|G|957
7ASO|1|X|C|958
7ASO|1|X|A|959
7ASO|1|X|U|960
7ASO|1|X|G|961
7ASO|1|X|U|962
7ASO|1|X|G|963
7ASO|1|X|G|964
7ASO|1|X|U|965
7ASO|1|X|U|966
7ASO|1|X|U|967
7ASO|1|X|A|968
7ASO|1|X|A|969
7ASO|1|X|U|970
7ASO|1|X|U|971
7ASO|1|X|C|972
7ASO|1|X|G|973
7ASO|1|X|A|974
7ASO|1|X|A|975
7ASO|1|X|G|976
7ASO|1|X|C|977
7ASO|1|X|A|978
7ASO|1|X|A|979
7ASO|1|X|C|980
7ASO|1|X|G|981
7ASO|1|X|C|982
7ASO|1|X|G|983
7ASO|1|X|A|984
7ASO|1|X|A|985
7ASO|1|X|G|986
7ASO|1|X|A|987
7ASO|1|X|A|988
7ASO|1|X|C|989
7ASO|1|X|C|990
7ASO|1|X|U|991
7ASO|1|X|U|992
7ASO|1|X|A|993
7ASO|1|X|C|994
7ASO|1|X|C|995
7ASO|1|X|A|996
7ASO|1|X|A|997
7ASO|1|X|A|998
7ASO|1|X|U|999
7ASO|1|X|C|1000
7ASO|1|X|U|1001
7ASO|1|X|U|1002
7ASO|1|X|G|1003
7ASO|1|X|A|1004
7ASO|1|X|C|1005
7ASO|1|X|A|1006
7ASO|1|X|U|1007
7ASO|1|X|C|1008
*
7ASO|1|X|G|1055
7ASO|1|X|A|1056
7ASO|1|X|C|1057
7ASO|1|X|A|1058
7ASO|1|X|G|1059
*
7ASO|1|X|C|1221
7ASO|1|X|U|1222
7ASO|1|X|U|1223
7ASO|1|X|A|1224
7ASO|1|X|U|1225
7ASO|1|X|G|1226
7ASO|1|X|A|1227
7ASO|1|X|U|1228
7ASO|1|X|U|1229
7ASO|1|X|U|1230
7ASO|1|X|G|1231
7ASO|1|X|G|1232
7ASO|1|X|G|1233
7ASO|1|X|C|1234
7ASO|1|X|U|1235
7ASO|1|X|A|1236
7ASO|1|X|C|1237
7ASO|1|X|A|1238
7ASO|1|X|C|1239
7ASO|1|X|A|1240
7ASO|1|X|C|1241
7ASO|1|X|G|1242
7ASO|1|X|U|1243
7ASO|1|X|G|1244
7ASO|1|X|C|1245
7ASO|1|X|U|1246
7ASO|1|X|A|1247
7ASO|1|X|C|1248
7ASO|1|X|A|1249
7ASO|1|X|A|1250
7ASO|1|X|U|1251
7ASO|1|X|G|1252
7ASO|1|X|G|1253
7ASO|1|X|A|1254
7ASO|1|X|C|1255
7ASO|1|X|A|1256
7ASO|1|X|A|1257
7ASO|1|X|U|1258
7ASO|1|X|A|1259
7ASO|1|X|C|1260
7ASO|1|X|A|1261
7ASO|1|X|A|1262
7ASO|1|X|A|1263
7ASO|1|X|G|1264
7ASO|1|X|G|1265
7ASO|1|X|G|1266
7ASO|1|X|C|1267
7ASO|1|X|A|1268
7ASO|1|X|G|1269
7ASO|1|X|C|1270
7ASO|1|X|G|1271
7ASO|1|X|A|1272
7ASO|1|X|A|1273
7ASO|1|X|A|1274
7ASO|1|X|C|1275
7ASO|1|X|C|1276
7ASO|1|X|G|1277
7ASO|1|X|C|1278
7ASO|1|X|G|1279
7ASO|1|X|A|1280
7ASO|1|X|G|1281
7ASO|1|X|G|1282
7ASO|1|X|U|1283
7ASO|1|X|C|1284
7ASO|1|X|A|1285
7ASO|1|X|A|1286
7ASO|1|X|G|1287
7ASO|1|X|C|1288
7ASO|1|X|A|1290
7ASO|1|X|A|1291
7ASO|1|X|U|1292
7ASO|1|X|C|1293
7ASO|1|X|C|1294
7ASO|1|X|C|1295
7ASO|1|X|A|1296
7ASO|1|X|U|1297
7ASO|1|X|A|1298
7ASO|1|X|A|1299
7ASO|1|X|A|1300
7ASO|1|X|G|1301
7ASO|1|X|U|1302
7ASO|1|X|U|1303
7ASO|1|X|G|1304
7ASO|1|X|U|1305
7ASO|1|X|U|1306
7ASO|1|X|C|1307
7ASO|1|X|U|1308
7ASO|1|X|C|1309
7ASO|1|X|A|1310
7ASO|1|X|G|1311
7ASO|1|X|U|1312
7ASO|1|X|U|1313
7ASO|1|X|C|1314
*
7ASO|1|X|G|1345
7ASO|1|X|C|1346
7ASO|1|X|U|1347
7ASO|1|X|G|1348
7ASO|1|X|G|1349
7ASO|1|X|A|1350
7ASO|1|X|A|1351
7ASO|1|X|U|1352
7ASO|1|X|C|1353
7ASO|1|X|G|1354
Current chains
- Chain X
- 16S
Nearby chains
- Chain 1
- 30S ribosomal protein S10
- Chain 4
- 30S ribosomal protein S13
- Chain 5
- 30S ribosomal protein S14 type Z
- Chain B
- 30S ribosomal protein S3
- Chain G
- 30S ribosomal protein S7
- Chain H
- 30S ribosomal protein S9
- Chain I
- 30S ribosomal protein S19
Coloring options: