J4_7ASO_007

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GUUUC*GGUUAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

7ASO|1|Y|U|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASO|1|Y|G|1347
7ASO|1|Y|U|1348
7ASO|1|Y|U|1349
7ASO|1|Y|U|1350
7ASO|1|Y|C|1351
*
7ASO|1|Y|G|1375
7ASO|1|Y|G|1376
7ASO|1|Y|U|1377
7ASO|1|Y|U|1378
7ASO|1|Y|A|1379
7ASO|1|Y|G|1380
*
7ASO|1|Y|C|1441
7ASO|1|Y|C|1442
*
7ASO|1|Y|G|1641
7ASO|1|Y|C|1642
7ASO|1|Y|C|1643
7ASO|1|Y|C|1644
7ASO|1|Y|G|1645
7ASO|1|Y|U|1646
7ASO|1|Y|A|1647
7ASO|1|Y|C|1648

Current chains

Chain Y

23S

Nearby chains

Chain W

50S ribosomal protein L23

Chain i

50S ribosomal protein L34