J4_7AZY_001
3D structure
- PDB id
- 7AZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Context-specific inhibition of eukaryotic translation by macrolide antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.877 Å
Loop
- Sequence
- UC*GAGUCG*CUAAGUG*UAAA
- Length
- 19 nucleotides
- Bulged bases
- 7AZY|1|E|U|298
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7AZY_001 not in the Motif Atlas
- Homologous match to J4_8P9A_012
- Geometric discrepancy: 0.1006
- The information below is about J4_8P9A_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_45801.6
- Basepair signature
- cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7AZY|1|E|U|112
7AZY|1|E|C|113
*
7AZY|1|E|G|267
7AZY|1|E|A|268
7AZY|1|E|G|269
7AZY|1|E|U|270
7AZY|1|E|C|271
7AZY|1|E|G|272
*
7AZY|1|E|C|293
7AZY|1|E|U|294
7AZY|1|E|A|295
7AZY|1|E|A|296
7AZY|1|E|G|297
7AZY|1|E|U|298
7AZY|1|E|G|299
*
7AZY|1|E|U|316
7AZY|1|E|A|317
7AZY|1|E|A|318
7AZY|1|E|A|319
Current chains
- Chain E
- 25S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L35-A
- Chain R
- 60S ribosomal protein L15-A
- Chain d
- 60S ribosomal protein L36-A
- Chain k
- 60S ribosomal protein L13-A
Coloring options: