J4_7AZY_006
3D structure
- PDB id
- 7AZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Context-specific inhibition of eukaryotic translation by macrolide antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.877 Å
Loop
- Sequence
- GACUG*CAUAG*UGAUU*AUUAAC
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7AZY_006 not in the Motif Atlas
- Homologous match to J4_8P9A_017
- Geometric discrepancy: 0.0624
- The information below is about J4_8P9A_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_07509.2
- Basepair signature
- cWW-tSW-F-F-tHS-F-cWW-F-cWW-F-F-tHS-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
7AZY|1|E|G|2130
7AZY|1|E|A|2131
7AZY|1|E|C|2132
7AZY|1|E|U|2133
7AZY|1|E|G|2134
*
7AZY|1|E|C|2146
7AZY|1|E|A|2147
7AZY|1|E|U|2148
7AZY|1|E|A|2149
7AZY|1|E|G|2150
*
7AZY|1|E|U|2186
7AZY|1|E|G|2187
7AZY|1|E|A|2188
7AZY|1|E|U|2189
7AZY|1|E|U|2190
*
7AZY|1|E|A|2317
7AZY|1|E|U|2318
7AZY|1|E|U|2319
7AZY|1|E|A|2320
7AZY|1|E|A|2321
7AZY|1|E|C|2322
Current chains
- Chain E
- 25S ribosomal RNA
Nearby chains
- Chain U
- 60S ribosomal protein L43-A
- Chain x
- 60S ribosomal protein L2-A
Coloring options: