J4_7BHP_009

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUGC*GCG*CUUAAGGUAG*UGAAUG

Length

23 nucleotides

Bulged bases

7BHP|1|L5|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|L5|C|3696
7BHP|1|L5|U|3697
7BHP|1|L5|G|3698
7BHP|1|L5|C|3699
*
7BHP|1|L5|G|3751
7BHP|1|L5|C|3752
7BHP|1|L5|G|3753
*
7BHP|1|L5|C|3771
7BHP|1|L5|U|3772
7BHP|1|L5|U|3773
7BHP|1|L5|A|3774
7BHP|1|L5|A|3775
7BHP|1|L5|G|3776
7BHP|1|L5|G|3777
7BHP|1|L5|U|3778
7BHP|1|L5|A|3779
7BHP|1|L5|G|3780
*
7BHP|1|L5|U|3814
7BHP|1|L5|G|3815
7BHP|1|L5|A|3816
7BHP|1|L5|A|3817
7BHP|1|L5|U|3818
7BHP|1|L5|G|3819

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LA

60S ribosomal protein L8